BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G01SP1|AL428429
(524 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1183 925 0.0
>3x_Contig1183
Length = 3176
Score = 925 bits (447), Expect = 0.0
Identities = 488/523 (93%)
Strand = Plus / Minus
Query: 1 atatatttatattattattttaatttattcagataggatagattcgaactaactaactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 atatatttatattattattttaatttattcagataggatagattcgaactaactaactct 1428
Query: 61 ttctcccaaagaaagcgcctaacccttcggcctmaatctgttattatataagcatattta 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1427 ttctcccaaagaaagcgcctaacccttcggcctctatctgttattatataagcatattta 1368
Query: 121 tattatttatttcaatcaaatatatattatatatttyattattaattaattaatatttat 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1367 tattatttatttcaatcaaatatatattatatattttattattaattaattaatatttat 1308
Query: 181 atatatcaaatatatattatatattayymyyyatgattatytatattaattatattatat 240
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 1307 atatatcaaatatatattatatattattatttatgattatttatattaattatattatat 1248
Query: 241 taataatatgacttcctatatatattatayattayyayyaycmymbaattagcaataata 300
||||||||||||||||||||||||||||| |||| | | ||||||||||||||
Sbjct: 1247 taataatatgacttcctatatatattatatattattattattatataattagcaataata 1188
Query: 301 cgagttgaacgtatatgtktaggtsatgagsstaatatgttaccaattacattatattgc 360
|||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 1187 cgagttgaacgtatatgtttaggtcatgagcctaatatgttaccaattacattatattgc 1128
Query: 361 tataaatygacccattaacgtgggtcatccacacccatataagggtggatgacccgcgtg 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 tataaattgacccattaacgtgggtcatccacacccatataagggtggatgacccgcgtg 1068
Query: 421 ggtagtatataymsvvsvsabgaagagaatcgaactctaaatgtgtagatttgcaatcta 480
||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 ggtagtatatatataagagatgaagagaatcgaactctaaatgtgtagatttgcaatcta 1008
Query: 481 acagtttaacctttaaacaacatttcctctaacttatatatat 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 acagtttaacctttaaacaacatttcctctaacttatatatat 965
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.719 1.35
Gapped
Lambda K H
1.44 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5513
Number of Sequences: 1807
Number of extensions: 5513
Number of successful extensions: 315
Number of sequences better than 1.0e-20: 1
length of query: 524
length of database: 10,358,551
effective HSP length: 16
effective length of query: 508
effective length of database: 10,329,639
effective search space: 5247456612
effective search space used: 5247456612
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.2 bits)
S2: 48 (99.9 bits)